Full extrinsic apoptosis model files (M1a-M15a)¶
Lopez Models (M1a - M3a)¶
Model M1a: Extrinsic apoptosis model with expanded, “embedded together” model of MOMP.
Model M2a: Extrinsic apoptosis model with expanded “direct” model of MOMP.
Model M3a: Extrinsic apoptosis model with expanded “indirect” model of MOMP.
Albeck Models (M4a - M8a)¶
Model M4a: Extrinsic apoptosis model incorporating the MOMP model “Minimal Model” (Figure 11b) from [Albeck2008].
Model M5a: Extrinsic apoptosis model incorporating the MOMP model “Model B + Bax multimerization” (Figure 11c) from [Albeck2008].
Model M6a: Extrinsic apoptosis model incorporating the MOMP model “Model C + mitochondrial transport” (Figure 11d) from [Albeck2008].
Model M7a: Extrinsic apoptosis model incorporating the MOMP model “Current model” (Figure 11e) from [Albeck2008].
Model M8a: Extrinsic apoptosis model incorporating the MOMP model “Current model + cooperativity” (Figure 11f) from [Albeck2008].
Shen Models (M9a - M15a)¶
Model M9a: Extrinsic apoptosis model incorporating the MOMP model from [Chen2007biophysj].
Model M10a: Extrinsic apoptosis model incorporating the “Direct” MOMP model from [Chen2007febs].
Model M11a: Extrinsic apoptosis model incorporating the “Indirect” MOMP model from [Chen2007febs].
Model M12a: Extrinsic apoptosis model incorporating the “Direct” MOMP model from [Cui2008].
Model M13a: Extrinsic apoptosis model incorporating the “Direct 1” MOMP model from [Cui2008].
Model M14a: Extrinsic apoptosis model incorporating the “Direct 2” MOMP model from [Cui2008].
Model M15a: Extrinsic apoptosis model incorporating the MOMP model from [Howells2011].
MOMP-only model files (M1b-M15b)¶
Lopez Models (M1b - M3b)¶
Model M1b: Expanded “embedded together” model of MOMP.
Model M2b: Expanded “direct” model of MOMP.
Model M3b: Expanded “indirect” model of MOMP.
Albeck Models (M4b - M8b)¶
Model M4b: MOMP model “Minimal Model” (Figure 11b) from [Albeck2008].
Model M5b: MOMP model “Model B + Bax multimerization” (Figure 11c) from [Albeck2008].
Model M6b: MOMP model “Model C + mitochondrial transport” (Figure 11d) from [Albeck2008].
Model M7b: MOMP model “Current model” (Figure 11e) from [Albeck2008].
Model M8b: MOMP model “Current model + cooperativity” (Figure 11f) from [Albeck2008].
Shen Models (M9b - M15b)¶
Model M9b: MOMP model from [Chen2007biophysj].
Model M10b: “Direct” MOMP model from [Chen2007febs].
Model M11b: “Indirect” MOMP model from [Chen2007febs].
Model M12b: “Direct” MOMP model from [Cui2008].
Model M13b: “Direct 1” MOMP model from [Cui2008].
Model M14b: “Direct 2” MOMP model from [Cui2008].
Model M15b: MOMP model from [Howells2011].