Source code for earm.mito.chen_febs_indirect

"""
Model M11b: "Indirect" MOMP model from [Chen2007febs]_.
"""

from pysb import *
from earm import shen_modules

Model()

shen_modules.momp_monomers()

# The specific MOMP model to use
shen_modules.chen_febs_indirect()

# Observables
Observable('Bax4_', MatchOnce(Bax(bf=None, s1=1, s2=4) %
                              Bax(bf=None, s1=2, s2=1) %
                              Bax(bf=None, s1=3, s2=2) %
                              Bax(bf=None, s1=4, s2=3)))
Observable('Bid_', Bid(bf=None))
Observable('Bcl2_', Bcl2(bf=None))
Observable('Bcl2_Bid_', Bcl2(bf=1) % Bid(bf=1))
Observable('Bcl2_Bax_', Bcl2(bf=1) % Bax(bf=1))